draft_major_update_1

Proposal/cyto_proposal_draft_files/colorschememapping.xml

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+<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
+<a:clrMap xmlns:a="http://schemas.openxmlformats.org/drawingml/2006/main" bg1="lt1" tx1="dk1" bg2="lt2" tx2="dk2" accent1="accent1" accent2="accent2" accent3="accent3" accent4="accent4" accent5="accent5" accent6="accent6" hlink="hlink" folHlink="folHlink"/>

Proposal/cyto_proposal_draft_files/filelist.xml

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+<xml xmlns:o="urn:schemas-microsoft-com:office:office">
+ <o:MainFile HRef="../cyto_proposal_draft.html"/>
+ <o:File HRef="themedata.thmx"/>
+ <o:File HRef="colorschememapping.xml"/>
+ <o:File HRef="image001.png"/>
+ <o:File HRef="image002.png"/>
+ <o:File HRef="image003.png"/>
+ <o:File HRef="filelist.xml"/>
+</xml>

Proposal/preview.gml

@@ -0,0 +1,11 @@
+node
+[
+	id	0
+	label	"YKR026C"
+	graphics
+	[
+		x	1916.0
+		type	"ellipse"
+		fill	"#E1E1E1"
+	]
+]

Proposal/preview.xgmml

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+<node id="-331" label="YBR043C">
+    <att label="gal1RGexp" name="gal1RGexp" value="0.454" type="real"/>
+    <att label="GO Cellular Component" name="GO Cellular Component" type="list">
+        <att value="cell" type="string"/>
+        <att value="cell part" type="string"/>
+    </att>
+    <graphics width="1" fill="#fcfffd">
+        <att name="cytoscapeNodeGraphicsAttributes">
+            <att name="nodeTransparency" value="1.0"/>
+            <att name="nodeLabelFont" value="Default-0-12"/>
+        </att>
+    </graphics>
+</node>

Proposal/preview_json_of_gml.json

@@ -0,0 +1,12 @@
+[
+    { data: {
+                "id":0,
+                "label":"YKR026C",
+                "graphics":{"x":1916.0,
+                            "type":"ellipse",
+                            "fill":"#E1E1E1",
+                            }
+            },
+      "group": "nodes"
+    }
+]

Proposal/preview_json_of_xgmml.json

@@ -0,0 +1,17 @@
+[
+    { data: {
+                "id":"YKR026C",
+                "label":"YBR043C",
+                "gal1RGexp":0.454,
+                "GO Cellular Component":["cell", "cell part"],
+                "graphics":{"width":"1",
+                            "fill":"#fcfffd",
+                            "cytoscapeNodeGraphicsAttributes":{
+                                                                "nodeTransparency":"1.0",
+                                                                "nodeLabelFont":"Default-0-12"
+                                                              }
+                            }
+            },
+      "group": "nodes"
+    }
+]